Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931733.1_cds_XP_016478456.1_70093
CDS Infomation

[gene=LOC107799823] [db_xref=GeneID:107799823] [protein=pentatricopeptide repeat-containing protein At3g59040-like] [protein_id=XP_016478456.1] [location=complement(join(9791..10427,11026..11124,15889..16013,16615..16863,22856..23146,23567..23879,24626..24690))] [gbkey=CDS]
Sequence

ATGCCTCAAACAATGATGATTTTCCTCAAACCATTCATTTCAGCTCCCTCTTCTTCCCTC
TGGAGTAAATCAAATAGTGGTGGGAATTTATTGGATACAAATGTTAAAATATGTAAAAGA
GCAGAAGTGGTGTGTCAAGGCATGCTGGCGCCGAGAAAGTTCATGCAGAAGAGGAAGAAA
GTAGAGGTTTTCAAGAGTGCCGAGGACGAAGCAGACCAGAAAAACTGGAGAAAGATGATG
AATGAAATTGAAGAAACTGGTTCTGCTGTTTCGGTGCTGAGAAGCCAGAGGTCCAAGAAC
CAGGGTCTTCCCAAGGACCTTGTTCTTGGAAGCTTGGTTCGATTTAAACAGCTTAAGAAG
TGGAACCTTGTTAGTGAGATTCTTGAATGGCTTCAAACTCAACACTGGTGGGATTTTAAT
GAAATGGACTTTCTGATGCTTATTACGGCCTACGGGAAGGAAGGGGAATTCAGTAAAGCT
GAAAGCCTTTTAGGCTACATGAATAAGAAGGGCTATTCCCCGAATGTGATATCTCACACT
GCTCTGATGGAGGCATATGGAAAAGGAGGTCAATACAGTAAGGCAGAAGCGATATTTCGG
AGAATGCAAACCTCAGGCCCTGAACCTTCTGCTATTACATACCAAATCATTCTCAAAATC
TTTGTTGAGGGTGACAAATTTGATGAAGCTCAAGAAGTCTTTGAAGCTCTTATGGACATG
GATGCACCTCCGCTAAAACCAGATCAGAAAATGTTCCACATGATGATCTATATGTATAAG
AAGGCTGGGAAATATGAGAAAGCTCGTCAGCTGTTTTCTTTGATGGCCGAGCGAGGAATT
CCACAAAATACGGTTACTTACAACAGTTTGATGTCGTTTGAGACTAACTACAAGGAGGTT
GCGAACATTTATGATCAGATGCAAAGAGCTGGTCTTCGGCCTGATGTTGTTAGCTATGCC
CTGCTCATTAGTGCATATGGAAAGGCTAGAAGAGAAGAGGAGGCACTCGCTGTTTTTGAG
GAAATGCTTGATGCTGGTGTCAGGCCAACACAGAAATCTTACAACATCTTGCTAGATGCA
TTTGCAATCTCAGGAATGGTCGAACAAGCCCGAAATGTCTTCAAAAGCATGCGAAGAGAC
AGATGTAGCCCCGACCTTTGCTCATACACAACAATGCTATCTGCTTATATTAATGCACCG
GATATGGAGGGTGCTGAGAAATTTTTCAGAAGAATAAAGCAGGATGGATTGGAGCCCAAT
GTTGTCACATACGGCACACTGATTAAGGGATATGCAAAAATAAATGACCTCGAAAAGATG
ATGGAGAAATATGAACAAATGCGGGTCCATGGTATCAAGGCTAACCAAACTATCTTCACT
ACAATCATGGACGCGAATGGTAGGAATAAGGAATTTGGCAGTGCCGTTGCTTGGTTCAAT
GAGATGGTATCTTCCGGGGTATCTCCTGATCAAAAAGCAAAGAACATTCTCTTGTCCTTG
GCAAAAACGTCGGAAGAACAGATGGAAGCTAAGCAGCTTACAGGATGCGCCAACGAGCTG
ATAGTTGACAGAATTCCCAATTACATCAATAATAATGATGAAGACGACTATGACGATGAC
GATGATGATGGTAGTAGTGATGACGAAGATGACTATGACGATGATGATGGTAGTGGTGAT
AATGAAGACTATGATGATGACAATAATGCAAAAATGAGCATTTTGTCAGGAGAAAAATTG
GATCAACTAACAGTTAGTGGTAGTGCATCTCAGACGTAA

Peptide Sequence

PEP ID

XP_016478456.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like [Nicotiana tabacum]
Sequence

MPQTMMIFLKPFISAPSSSLWSKSNSGGNLLDTNVKICKRAEVVCQGMLAPRKFMQKRKK
VEVFKSAEDEADQKNWRKMMNEIEETGSAVSVLRSQRSKNQGLPKDLVLGSLVRFKQLKK
WNLVSEILEWLQTQHWWDFNEMDFLMLITAYGKEGEFSKAESLLGYMNKKGYSPNVISHT
ALMEAYGKGGQYSKAEAIFRRMQTSGPEPSAITYQIILKIFVEGDKFDEAQEVFEALMDM
DAPPLKPDQKMFHMMIYMYKKAGKYEKARQLFSLMAERGIPQNTVTYNSLMSFETNYKEV
ANIYDQMQRAGLRPDVVSYALLISAYGKARREEEALAVFEEMLDAGVRPTQKSYNILLDA
FAISGMVEQARNVFKSMRRDRCSPDLCSYTTMLSAYINAPDMEGAEKFFRRIKQDGLEPN
VVTYGTLIKGYAKINDLEKMMEKYEQMRVHGIKANQTIFTTIMDANGRNKEFGSAVAWFN
EMVSSGVSPDQKAKNILLSLAKTSEEQMEAKQLTGCANELIVDRIPNYINNNDEDDYDDD
DDDGSSDDEDDYDDDDGSGDNEDYDDDNNAKMSILSGEKLDQLTVSGSASQT

Transcript Sequence

Gene sequence data has not been registered.